Thanks all for the comments. I took a drive back to the machine shop this morning to ask a couple more questions.
They haven't disassembled the engine any farther than was done the other day, and that was just to pull the heads. I did question Rich, the machinist, about the piston to skirt clearance, and, although he doesn't remember the exact numbers, for my engine he honed for a .002 clearance.
We did measure the bore on a couple cylinders and they were all within .0003, including cylinders 4 and 8.
I was most interested in the scuffing above the top ring on cylinder 8, and found that the marking is not scoring of the cylinder wall. Rather, it's aluminum from the top ring land. The #8 cylinder, which shows this most prominently in the pictures
, has that scuffing about 90° around the "bottom' of the cylinder. The #4 cylinder has this same scuffing around the top. I even took my pen knife and was able to scrape away the aluminum.
As I said, I do appreciate all the comments and suggestions. They really did make me think, mostly about how little I know about putting together, and diagnosing mechanical engine problems. But, I do have confidence in this shop. It's run by two brothers, one of whom has been a mechanic all his working life, and his brother has been an automotive machinist most of his life. Twenty years ago they decided to open their own shop. They must have been doing something right because they were recommended to me by several people fifteen years ago when I had thoughts of restoring an old El Camino that I had drug out to Phoenix with me. Most of their business now is in performance engines, both for dirt and asphalt circle track racers, and drag racers. I think, because of that, they seem pretty comfortable diagnosing engine failures. Plus, considering the number of engines they had stacked up around the shop waiting on them, they must not have too bad a rep among the racers.
I now have all of my fuel injection issues resolved. I'll let these guys put the engine together again, and start all over. If I have another problem, it will be time to just do this myself.