Thanks Paul, sorry here are better pics...this is the 72 and this is how it was wired when I got it, only with alligator clips %). It had a dusty crusty old alternator that was not even hooked up, so I grabbed a better one I had from a Mustang and added a new alternator harness from JBG. Also it had NO voltage regulator, so that's what's in the box. It starts and runs just fine with this configuration.
When I connected the new alt harness I got nothing, no crank. Never hooked up the regulator, but it's not part of the starting circuit so, first things first. Been looking over diagrams trying to figure out how that temporary connection to the battery was lost when the alternator was connected. When you said...
"Originally the starter relay there on the wheel well with the battery wire going to it would also have had the extension of the Black w/yellow wire (along with a fusible link) connected right under the battery cable on the big stud.
I don't see anything there currently."
...then it made sense, and that's probably the culprit. Will follow up thanks again
Jeff