I compared the depth from the very back of the MC inside to where it hits the valve, and it matches the measurement of the plunger/rod that comes out of the Vacuum Booster. They are the same.
Glad you checked that. Most don't.
Were the master and booster assembled when you got them? Doesn't sound like it, so it's a good thing to check. In fact, I would check it again because it's so often the cause of at least part of the same problems you're having.
My method is not very scientific. I adjust the rod out until the master cylinder piston just bottoms out on the rod, BEFORE the mating flange bottoms out on the booster face. Then I turn the rod back in (shorter) until the two assemblies mate up with just the barest amount of clearance between the rod and piston.
Even though it's more work, you might just re-visit that to be 100% sure it's not an issue. Even though you already measured it.
If your prop valve has the little delay valve nipple thingy sticking out, pull it when you bleed the front brakes.
When you are checking things, is your parking brake applied? If not, then the next time you try the pedal, and find it travels too far, apply the parking brake and see if that shortens the pedal throw. If it does, then your rear brakes are not adjusted quite enough.
Yes, both reservoirs are the same size. Their current advertisement suggests it can be used for 4 wheel Disc or a combo of Disc/Drum.
Correct. This is probably the single most common aftermarket master cylinder design there is. Most Fords had the two size reservoirs, and others did as well.
The very first Ford dual master cylinders however, had equal size reservoirs as well. Found even on Broncos in about '68 and maybe '69. Not sure, but they were plentiful when some vehicles still had 4-wheel drums, but discs were becoming more of a thing. They were much smaller than these however.
I went out and disconnected the MC from the booster and fired up the Bronco. Plunger extends out the entire length of the brake pedal stroke and I cannot hold it back by hand, so I have to assume it is building pressure against the valve portion inside the MC.
Correct. At least a reasonable assumption.
But I hope you didn’t do any damage by over extending it without the resistance of the master in front of it. As a limiter so to speak.
I don’t know for a fact that you can damage the diaphragm of a vacuum booster, but I know it’s a very serious thing with Hydro boost setups.
So I usually don’t recommend doing it. But if you have to, try to keep your pedal travel to an absolute minimum.
They did include an adapter to go inside the MC that I did not use, because it would make the plunger flush with the back of the MS, and there does not appear to be anyway the MC would be able to mount to the Vacuum Booster that way. The rod cannot go back in the MC any further that it is.
Common enough, so it sounds like you made the right decision. There are many types of boosters, but in this category, there are two.
Those with long rods that stick out way past the face of the Booster and those with short rods that barely make it to the end of the booster.
Some setups aren’t even adjustable at all. But I think most are at least slightly adjustable one way or the other.