The top piece should only have holes in it. Use the Cleko's to hold in place. 3/8" is fine but the underlying metal should be bare steel, no holes, and have a light coating of weld thru primer on it. Every 4" or so should have a weld. The best way is a spot welder but you will be fine with the mig. Apply 2K primer, sand then seam sealer on both sides.