yep, what he said. Any of the chassis harnesses will work just fine, and will frankly be better and easier to connect to than a stock one.
In my opinion, the best thing you could do to any harness would be to add a few extra grounding points. This keeps communications happy between the computer and all the sensors and the odd floating electron or three-million.
Crawl around any modern car or truck and you'll see what I mean. Ground wires/straps/cables from the battery to the engine, battery to body, as well as between the engine and firewall, engine and frame, body and frame, etc. Heck, even the hoods are grounded to the rest of the body with an extra strap! No stray signals or interference allowed.
Any place you can think of to bond one part of the truck to another is good.
Is it overkill? Maybe... But maybe not. And with all the extra work you're going through to install a modern fuel-injection system, might as well be safe, rather than sorry and chasing your tail around town looking for some small fault that just turned out to be a bad signal back to the ECM.
Have fun!
Paul