Yep, that's farther than I thought from your earlier description. I still think it'll fit in there fine though, since you said your original was in the same position. And so was mine for that matter.
I figured that with mine it was because one of my rear radius arm mounts had been pulled forward (passenger side) by either an impact at some point in it's life, or by someone trying to align it, or it was simply welded on incorrectly from the factory.
All of the above are plausible.
Even though you're putting pressure on it, I would still do it. There's even another thread about that just in the past couple of days you can check out. In the OP's case in that one, it was farther back than yours and did not match the factory bar.
The only things to correct it are to either bend the lower mount towards the passenger side (not sure how best to do it, but it would be possible), relocate one rear radius arm mount (possible to do as well, but not really very a sensible solution I don't think), or to move your trackbar mount to the rear (also not necessarily the best way to do it).
Or you could tweak the bar itself.
Of course, you could also take measurements along the frame rails to make sure your truck is square still, but if it's off, getting it back to stock would involve some work. Been some guys here who've done their own frame straightening, but it's usually better done at a shop.
If the bar was different from your original, I'd take it back certainly. But since that wouldn't fix your issue, and should not cause any more trouble than your original has done over the years, I would say to leave that until the last choice.
Oh, and wait until you've got your engine and stuff back in too, before making any determination on it.
If you can leave it off until then, that would be the way to go. If you need to put it on ahead of time for whatever reason, I would not hesitate to pull it into place.
Paul