Engine runs fine on Aux, but I did notice that the fuel gauge is now just showing empty. On the main with the pump, it shoots up to about 3/4 full which is about right. Switching to aux just shows empty even though I know the aux tank is full. I swear both were showing full when I did the install but as soon as I started it up, the aux went to empty. Any idea what could be happening? Maybe a faulty sender now at the aux tank?How does engine run when switched to aux tank?
If it runs OK then mechanical fuel is working, and there is no need for electric pump at main tank.
Remove electric pump and connect fuel line to main tank.
If it won't run when on aux tank, fix mechanical pump.