With a twin stick wouldn't you remove the pill between the shift rails so the front and rear could be shifted independently?
In a J shift, the pill doesn't prevent independent shifting. The flags do that unless/until they are modified. The pill just limits the maximum travel of the rails, which is a good thing. You wouldn't want to have a low range gear with only 50% tooth contact when you are on the throttle heavy.
In a T shift, the pills do both those jobs. So if you take the pills out to gain independent shifting, you risk having some gear misalignment, unless the rails are modified to mimic the J rails (I think JB Fab rails are like this) or you replace them with J rails and a single pill. Also, T rails don't have good detents for the balls like the J rails. This compounds the problem with misalignment.