No pics at the moment, but I could get some if you need them.
Basically, if I'm reading this right, the top one would be the driver's side, where the end with the large hole would be the lower end (fits into the body) and the left side in the pic would go up into the top.
They should only fit one way I would think, so you should be able to line up the welded nuts with their corresponding holes in the top and the body.
While they're not an absolute necessity, and some people leave them out, I prefer to leave them in for that one little extra bit of security when running the hard top.
When removing the top, they would usually stay bolted to the top and pull out of the body. To do this more easily, it's a good idea to loosen the wiper motor assembly to let it slip back just a bit. Clears the front lip just a little better and lets you maneuver the admittedly awkward thingies out of the rear stake pockets.
Paul